Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.52■□□□□ 0.88
Prpf4bQ61136 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.52■□□□□ 0.88
Prpf4bQ61136 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf4bQ61136 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf4bQ61136 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Prpf4bQ61136 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf4bQ61136 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf4bQ61136 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Mir5133-201ENSMUST00000174955 77 ntBASIC20.51■□□□□ 0.87
Prpf4bQ61136 Gm6365-201ENSMUST00000054711 744 ntBASIC20.51■□□□□ 0.87
Prpf4bQ61136 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Prpf4bQ61136 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.5■□□□□ 0.87
Prpf4bQ61136 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf4bQ61136 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf4bQ61136 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Prpf4bQ61136 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf4bQ61136 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Gm7290-201ENSMUST00000104990 617 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 Gm12918-201ENSMUST00000120234 636 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 Gm15710-201ENSMUST00000121821 636 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 Gm22325-201ENSMUST00000158904 308 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 Gm5075-201ENSMUST00000196916 622 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.47■□□□□ 0.87
Prpf4bQ61136 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf4bQ61136 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms