Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tnfaip3Q60769 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tnfaip3Q60769 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tnfaip3Q60769 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Gm10698-201ENSMUST00000182663 604 ntBASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tnfaip3Q60769 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.82■□□□□ 0.28
Tnfaip3Q60769 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Gm15375-201ENSMUST00000119510 849 ntBASIC16.81■□□□□ 0.28
Tnfaip3Q60769 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfaip3Q60769 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Mir6349-201ENSMUST00000184059 97 ntBASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfaip3Q60769 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfaip3Q60769 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tnfaip3Q60769 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfaip3Q60769 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfaip3Q60769 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.78■□□□□ 0.28
Tnfaip3Q60769 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.78■□□□□ 0.28
Tnfaip3Q60769 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfaip3Q60769 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms