Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Gm42642-201ENSMUST00000200683 355 ntBASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tsr1Q5SWD9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Tsr1Q5SWD9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tsr1Q5SWD9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Tsr1Q5SWD9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Gm18671-201ENSMUST00000214826 683 ntBASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tsr1Q5SWD9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Gm10849-201ENSMUST00000100397 618 ntBASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Gm10033-202ENSMUST00000211874 928 ntBASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tsr1Q5SWD9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms