Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Gm15375-201ENSMUST00000119510 849 ntBASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Mtag2-201ENSMUST00000058665 714 ntBASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav2Q5R1I9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav2Q5R1I9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Mir6349-201ENSMUST00000184059 97 ntBASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trav2Q5R1I9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav2Q5R1I9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav2Q5R1I9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav2Q5R1I9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms