Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3-1Q5R1I8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-1Q5R1I8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.21□□□□□ -0.46
Trav3-1Q5R1I8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-1Q5R1I8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms