Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clhc1Q5M6W3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clhc1Q5M6W3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Haglr-201ENSMUST00000100000 2085 ntBASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clhc1Q5M6W3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.28■□□□□ 0.36
Clhc1Q5M6W3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms