Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rc3h1Q4VGL6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h1Q4VGL6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Gm21814-202ENSMUST00000203277 873 ntBASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h1Q4VGL6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.72■□□□□ 0.91
Rc3h1Q4VGL6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rc3h1Q4VGL6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rc3h1Q4VGL6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rc3h1Q4VGL6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rc3h1Q4VGL6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms