Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pds5bQ4VA53 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Pds5bQ4VA53 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pds5bQ4VA53 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Pds5bQ4VA53 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Pds5bQ4VA53 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
Pds5bQ4VA53 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
Pds5bQ4VA53 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC31.47■■■□□ 2.63
Pds5bQ4VA53 AC153889.1-201ENSMUST00000219257 330 ntBASIC31.47■■■□□ 2.63
Pds5bQ4VA53 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pds5bQ4VA53 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC31.47■■■□□ 2.63
Pds5bQ4VA53 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Pds5bQ4VA53 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pds5bQ4VA53 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pds5bQ4VA53 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC31.46■■■□□ 2.63
Pds5bQ4VA53 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC31.46■■■□□ 2.63
Pds5bQ4VA53 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC31.46■■■□□ 2.63
Pds5bQ4VA53 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pds5bQ4VA53 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pds5bQ4VA53 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pds5bQ4VA53 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pds5bQ4VA53 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Pds5bQ4VA53 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC31.45■■■□□ 2.62
Pds5bQ4VA53 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 AC159301.1-201ENSMUST00000225130 1182 ntBASIC31.44■■■□□ 2.62
Pds5bQ4VA53 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Cxcl14-202ENSMUST00000224801 1467 ntBASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
Pds5bQ4VA53 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC31.43■■■□□ 2.62
Pds5bQ4VA53 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC31.43■■■□□ 2.62
Pds5bQ4VA53 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC31.43■■■□□ 2.62
Pds5bQ4VA53 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pds5bQ4VA53 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pds5bQ4VA53 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC31.43■■■□□ 2.62
Pds5bQ4VA53 Gm10418-201ENSMUST00000100943 576 ntBASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Pds5bQ4VA53 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pds5bQ4VA53 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
Pds5bQ4VA53 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Pds5bQ4VA53 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pds5bQ4VA53 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC31.41■■■□□ 2.62
Pds5bQ4VA53 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
Pds5bQ4VA53 Gm11452-201ENSMUST00000122376 690 ntBASIC31.41■■■□□ 2.62
Pds5bQ4VA53 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Gm2651-201ENSMUST00000203560 838 ntBASIC31.4■■■□□ 2.62
Pds5bQ4VA53 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pds5bQ4VA53 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC31.39■■■□□ 2.62
Pds5bQ4VA53 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pds5bQ4VA53 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Pds5bQ4VA53 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Pds5bQ4VA53 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC31.37■■■□□ 2.61
Pds5bQ4VA53 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC31.37■■■□□ 2.61
Pds5bQ4VA53 Gm10052-201ENSMUST00000168019 960 ntBASIC31.37■■■□□ 2.61
Pds5bQ4VA53 Gm7729-201ENSMUST00000050143 801 ntBASIC31.37■■■□□ 2.61
Pds5bQ4VA53 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pds5bQ4VA53 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pds5bQ4VA53 AC154621.1-201ENSMUST00000226155 1119 ntBASIC31.36■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms