Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.07■□□□□ 0.32
Lin28bQ45KJ6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Gm43799-201ENSMUST00000201845 579 ntBASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lin28bQ45KJ6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lin28bQ45KJ6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lin28bQ45KJ6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Lin28bQ45KJ6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lin28bQ45KJ6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lin28bQ45KJ6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lin28bQ45KJ6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lin28bQ45KJ6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lin28bQ45KJ6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lin28bQ45KJ6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.02■□□□□ 0.31
Lin28bQ45KJ6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Gm12382-201ENSMUST00000122005 922 ntBASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Gm21814-202ENSMUST00000203277 873 ntBASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lin28bQ45KJ6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms