Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Treml4Q3LRV9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Treml4Q3LRV9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Treml4Q3LRV9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Timm23-208ENSMUST00000226683 750 ntBASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Treml4Q3LRV9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Treml4Q3LRV9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Treml4Q3LRV9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Treml4Q3LRV9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Treml4Q3LRV9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Treml4Q3LRV9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Treml4Q3LRV9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Treml4Q3LRV9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Treml4Q3LRV9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Treml4Q3LRV9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Treml4Q3LRV9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.76■□□□□ 0.27
Treml4Q3LRV9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Treml4Q3LRV9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Treml4Q3LRV9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.76■□□□□ 0.27
Treml4Q3LRV9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Treml4Q3LRV9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Treml4Q3LRV9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms