Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nhej1Q3KNJ2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nhej1Q3KNJ2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nhej1Q3KNJ2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Gm42778-201ENSMUST00000199644 553 ntBASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nhej1Q3KNJ2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nhej1Q3KNJ2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nhej1Q3KNJ2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Nhej1Q3KNJ2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nhej1Q3KNJ2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms