Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra1P97785 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra1P97785 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra1P97785 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gfra1P97785 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra1P97785 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gfra1P97785 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Gfra1P97785 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.82□□□□□ -0.04
Gfra1P97785 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.82□□□□□ -0.04
Gfra1P97785 Gm38285-201ENSMUST00000192928 922 ntBASIC14.82□□□□□ -0.04
Gfra1P97785 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.82□□□□□ -0.04
Gfra1P97785 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.82□□□□□ -0.04
Gfra1P97785 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.82□□□□□ -0.04
Gfra1P97785 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Gfra1P97785 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gfra1P97785 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
Gfra1P97785 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Gfra1P97785 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Gfra1P97785 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Gm6576-201ENSMUST00000169678 883 ntBASIC14.81□□□□□ -0.04
Gfra1P97785 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.81□□□□□ -0.04
Gfra1P97785 Gm10138-203ENSMUST00000206952 366 ntBASIC14.81□□□□□ -0.04
Gfra1P97785 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.81□□□□□ -0.04
Gfra1P97785 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gfra1P97785 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.81□□□□□ -0.04
Gfra1P97785 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gfra1P97785 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.8□□□□□ -0.04
Gfra1P97785 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.8□□□□□ -0.04
Gfra1P97785 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gfra1P97785 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.8□□□□□ -0.04
Gfra1P97785 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gfra1P97785 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gfra1P97785 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.79□□□□□ -0.04
Gfra1P97785 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.79□□□□□ -0.04
Gfra1P97785 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Gfra1P97785 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gfra1P97785 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gfra1P97785 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Gfra1P97785 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gfra1P97785 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gfra1P97785 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gfra1P97785 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra1P97785 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra1P97785 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gfra1P97785 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms