Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lhx1P63006 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
Lhx1P63006 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lhx1P63006 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.62■□□□□ 0.41
Lhx1P63006 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.62■□□□□ 0.41
Lhx1P63006 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.62■□□□□ 0.41
Lhx1P63006 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.62■□□□□ 0.41
Lhx1P63006 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lhx1P63006 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.62■□□□□ 0.41
Lhx1P63006 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx1P63006 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lhx1P63006 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.61■□□□□ 0.41
Lhx1P63006 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.61■□□□□ 0.41
Lhx1P63006 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lhx1P63006 Gm11643-201ENSMUST00000119578 864 ntBASIC17.61■□□□□ 0.41
Lhx1P63006 Gm12382-201ENSMUST00000122005 922 ntBASIC17.61■□□□□ 0.41
Lhx1P63006 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.61■□□□□ 0.41
Lhx1P63006 Gm37292-201ENSMUST00000192062 758 ntBASIC17.61■□□□□ 0.41
Lhx1P63006 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.61■□□□□ 0.41
Lhx1P63006 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.61■□□□□ 0.41
Lhx1P63006 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.61■□□□□ 0.41
Lhx1P63006 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Lhx1P63006 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.61■□□□□ 0.41
Lhx1P63006 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx1P63006 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.6■□□□□ 0.41
Lhx1P63006 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lhx1P63006 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lhx1P63006 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Lhx1P63006 Gm10418-201ENSMUST00000100943 576 ntBASIC17.6■□□□□ 0.41
Lhx1P63006 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.6■□□□□ 0.41
Lhx1P63006 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.6■□□□□ 0.41
Lhx1P63006 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lhx1P63006 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lhx1P63006 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Lhx1P63006 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.6■□□□□ 0.41
Lhx1P63006 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx1P63006 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx1P63006 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx1P63006 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lhx1P63006 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lhx1P63006 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lhx1P63006 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lhx1P63006 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx1P63006 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx1P63006 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx1P63006 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx1P63006 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Lhx1P63006 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.58■□□□□ 0.4
Lhx1P63006 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx1P63006 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lhx1P63006 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.58■□□□□ 0.4
Lhx1P63006 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Lhx1P63006 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx1P63006 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx1P63006 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Lhx1P63006 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx1P63006 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx1P63006 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lhx1P63006 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx1P63006 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Lhx1P63006 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx1P63006 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms