Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.81□□□□□ -0.36
Rpl39P62892 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpl39P62892 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpl39P62892 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl39P62892 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl39P62892 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.8□□□□□ -0.36
Rpl39P62892 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.8□□□□□ -0.36
Rpl39P62892 Gm27801-201ENSMUST00000184174 223 ntBASIC12.8□□□□□ -0.36
Rpl39P62892 Rps24-207ENSMUST00000224568 714 ntBASIC12.8□□□□□ -0.36
Rpl39P62892 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rpl39P62892 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpl39P62892 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl39P62892 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpl39P62892 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpl39P62892 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Rpl39P62892 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Tgds-204ENSMUST00000228543 1594 ntBASIC12.79□□□□□ -0.36
Rpl39P62892 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.79□□□□□ -0.36
Rpl39P62892 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.79□□□□□ -0.36
Rpl39P62892 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.79□□□□□ -0.36
Rpl39P62892 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Rpl39P62892 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpl39P62892 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpl39P62892 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpl39P62892 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpl39P62892 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpl39P62892 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpl39P62892 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rpl39P62892 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpl39P62892 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpl39P62892 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpl39P62892 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39P62892 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39P62892 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rpl39P62892 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39P62892 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpl39P62892 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms