Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Cpne2P59108 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Cpne2P59108 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Gm45417-201ENSMUST00000209533 758 ntBASIC15.13■□□□□ 0.01
Cpne2P59108 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cpne2P59108 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpne2P59108 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.13■□□□□ 0.01
Cpne2P59108 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.12■□□□□ 0.01
Cpne2P59108 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.12■□□□□ 0.01
Cpne2P59108 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
Cpne2P59108 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cpne2P59108 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cpne2P59108 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cpne2P59108 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cpne2P59108 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpne2P59108 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cpne2P59108 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.11■□□□□ 0.01
Cpne2P59108 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cpne2P59108 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cpne2P59108 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cpne2P59108 Gm6139-201ENSMUST00000079261 882 ntBASIC15.11■□□□□ 0.01
Cpne2P59108 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpne2P59108 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpne2P59108 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpne2P59108 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpne2P59108 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cpne2P59108 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpne2P59108 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cpne2P59108 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.1■□□□□ 0.01
Cpne2P59108 Gm27801-201ENSMUST00000184174 223 ntBASIC15.1■□□□□ 0.01
Cpne2P59108 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.1■□□□□ 0.01
Cpne2P59108 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.1■□□□□ 0.01
Cpne2P59108 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpne2P59108 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms