Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rp1P56716 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1P56716 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1P56716 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Rp1P56716 Gm33142-201ENSMUST00000193913 867 ntBASIC18.34■□□□□ 0.53
Rp1P56716 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rp1P56716 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1P56716 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Rp1P56716 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Rp1P56716 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.33■□□□□ 0.52
Rp1P56716 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1P56716 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rp1P56716 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Gm7638-201ENSMUST00000121348 967 ntBASIC18.32■□□□□ 0.52
Rp1P56716 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.32■□□□□ 0.52
Rp1P56716 Gm7370-201ENSMUST00000219471 767 ntBASIC18.32■□□□□ 0.52
Rp1P56716 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rp1P56716 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1P56716 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rp1P56716 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.31■□□□□ 0.52
Rp1P56716 Gm37025-201ENSMUST00000195159 829 ntBASIC18.31■□□□□ 0.52
Rp1P56716 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1P56716 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1P56716 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rp1P56716 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1P56716 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.3■□□□□ 0.52
Rp1P56716 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rp1P56716 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1P56716 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rp1P56716 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.29■□□□□ 0.52
Rp1P56716 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
Rp1P56716 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rp1P56716 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rp1P56716 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.29■□□□□ 0.52
Rp1P56716 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rp1P56716 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rp1P56716 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.29■□□□□ 0.52
Rp1P56716 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Rp1P56716 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1P56716 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rp1P56716 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rp1P56716 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.28■□□□□ 0.52
Rp1P56716 Gm7791-201ENSMUST00000219066 539 ntBASIC18.28■□□□□ 0.52
Rp1P56716 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rp1P56716 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rp1P56716 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.28■□□□□ 0.52
Rp1P56716 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rp1P56716 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1P56716 Notumos-201ENSMUST00000151998 2659 ntBASIC18.28■□□□□ 0.52
Rp1P56716 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rp1P56716 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rp1P56716 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rp1P56716 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms