Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Lbx1P52955 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lbx1P52955 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lbx1P52955 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.35■□□□□ 0.37
Lbx1P52955 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Lbx1P52955 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lbx1P52955 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lbx1P52955 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Lbx1P52955 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lbx1P52955 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Lbx1P52955 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lbx1P52955 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Lbx1P52955 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lbx1P52955 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lbx1P52955 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.34■□□□□ 0.37
Lbx1P52955 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lbx1P52955 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.34■□□□□ 0.37
Lbx1P52955 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lbx1P52955 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lbx1P52955 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lbx1P52955 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lbx1P52955 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lbx1P52955 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lbx1P52955 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lbx1P52955 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lbx1P52955 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lbx1P52955 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Lbx1P52955 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lbx1P52955 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.33■□□□□ 0.36
Lbx1P52955 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Lbx1P52955 Gm8097-201ENSMUST00000117903 829 ntBASIC17.33■□□□□ 0.36
Lbx1P52955 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.33■□□□□ 0.36
Lbx1P52955 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.33■□□□□ 0.36
Lbx1P52955 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.33■□□□□ 0.36
Lbx1P52955 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lbx1P52955 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lbx1P52955 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lbx1P52955 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Lbx1P52955 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lbx1P52955 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lbx1P52955 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.32■□□□□ 0.36
Lbx1P52955 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.32■□□□□ 0.36
Lbx1P52955 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.32■□□□□ 0.36
Lbx1P52955 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lbx1P52955 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lbx1P52955 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lbx1P52955 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.31■□□□□ 0.36
Lbx1P52955 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.31■□□□□ 0.36
Lbx1P52955 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 Gm23935-201ENSMUST00000102303 57 ntBASIC17.31■□□□□ 0.36
Lbx1P52955 Gm24270-201ENSMUST00000102326 57 ntBASIC17.31■□□□□ 0.36
Lbx1P52955 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.31■□□□□ 0.36
Lbx1P52955 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lbx1P52955 Gm24245-201ENSMUST00000157318 57 ntBASIC17.31■□□□□ 0.36
Lbx1P52955 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.31■□□□□ 0.36
Lbx1P52955 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lbx1P52955 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.31■□□□□ 0.36
Lbx1P52955 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lbx1P52955 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lbx1P52955 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lbx1P52955 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.3■□□□□ 0.36
Lbx1P52955 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lbx1P52955 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lbx1P52955 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lbx1P52955 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.3■□□□□ 0.36
Lbx1P52955 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lbx1P52955 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Lbx1P52955 Olfr129-201ENSMUST00000122318 993 ntBASIC17.3■□□□□ 0.36
Lbx1P52955 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lbx1P52955 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.3■□□□□ 0.36
Lbx1P52955 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lbx1P52955 Gm10175-201ENSMUST00000086013 645 ntBASIC17.3■□□□□ 0.36
Lbx1P52955 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lbx1P52955 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lbx1P52955 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.3■□□□□ 0.36
Lbx1P52955 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
Lbx1P52955 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.29■□□□□ 0.36
Lbx1P52955 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms