Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RoraP51448 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RoraP51448 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RoraP51448 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RoraP51448 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RoraP51448 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.94■□□□□ 0.3
RoraP51448 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.94■□□□□ 0.3
RoraP51448 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RoraP51448 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RoraP51448 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RoraP51448 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.94■□□□□ 0.3
RoraP51448 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RoraP51448 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RoraP51448 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.93■□□□□ 0.3
RoraP51448 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.93■□□□□ 0.3
RoraP51448 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RoraP51448 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.93■□□□□ 0.3
RoraP51448 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RoraP51448 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RoraP51448 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.92■□□□□ 0.3
RoraP51448 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Gm15375-201ENSMUST00000119510 849 ntBASIC16.92■□□□□ 0.3
RoraP51448 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.92■□□□□ 0.3
RoraP51448 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RoraP51448 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RoraP51448 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RoraP51448 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RoraP51448 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.91■□□□□ 0.3
RoraP51448 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.91■□□□□ 0.3
RoraP51448 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.91■□□□□ 0.3
RoraP51448 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RoraP51448 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.91■□□□□ 0.3
RoraP51448 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.91■□□□□ 0.3
RoraP51448 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RoraP51448 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RoraP51448 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.9■□□□□ 0.3
RoraP51448 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.9■□□□□ 0.3
RoraP51448 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Gm37055-201ENSMUST00000191866 133 ntBASIC16.9■□□□□ 0.3
RoraP51448 Gm18025-201ENSMUST00000221733 862 ntBASIC16.9■□□□□ 0.3
RoraP51448 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms