Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.38■□□□□ 0.37
Hnf4aP49698 Gm7291-201ENSMUST00000199147 382 ntBASIC17.38■□□□□ 0.37
Hnf4aP49698 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hnf4aP49698 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hnf4aP49698 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hnf4aP49698 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Hnf4aP49698 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hnf4aP49698 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Hnf4aP49698 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.36■□□□□ 0.37
Hnf4aP49698 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hnf4aP49698 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
Hnf4aP49698 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hnf4aP49698 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hnf4aP49698 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Hnf4aP49698 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hnf4aP49698 Rarb-207ENSMUST00000225921 2756 ntBASIC17.34■□□□□ 0.37
Hnf4aP49698 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Hnf4aP49698 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.34■□□□□ 0.37
Hnf4aP49698 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hnf4aP49698 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hnf4aP49698 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hnf4aP49698 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hnf4aP49698 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hnf4aP49698 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hnf4aP49698 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hnf4aP49698 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Hnf4aP49698 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hnf4aP49698 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hnf4aP49698 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Mir5133-201ENSMUST00000174955 77 ntBASIC17.33■□□□□ 0.36
Hnf4aP49698 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.33■□□□□ 0.36
Hnf4aP49698 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.33■□□□□ 0.36
Hnf4aP49698 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.33■□□□□ 0.36
Hnf4aP49698 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hnf4aP49698 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hnf4aP49698 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Hnf4aP49698 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hnf4aP49698 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms