Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Gm18025-201ENSMUST00000221733 862 ntBASIC17.16■□□□□ 0.34
Tnfsf9P41274 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfsf9P41274 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.16■□□□□ 0.34
Tnfsf9P41274 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Gm715-201ENSMUST00000117865 831 ntBASIC17.15■□□□□ 0.34
Tnfsf9P41274 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfsf9P41274 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tnfsf9P41274 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tnfsf9P41274 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf9P41274 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Mir7071-201ENSMUST00000184847 69 ntBASIC17.14■□□□□ 0.33
Tnfsf9P41274 Gm43183-201ENSMUST00000200632 547 ntBASIC17.14■□□□□ 0.33
Tnfsf9P41274 Gm42545-201ENSMUST00000202755 922 ntBASIC17.14■□□□□ 0.33
Tnfsf9P41274 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfsf9P41274 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.13■□□□□ 0.33
Tnfsf9P41274 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.13■□□□□ 0.33
Tnfsf9P41274 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.13■□□□□ 0.33
Tnfsf9P41274 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.13■□□□□ 0.33
Tnfsf9P41274 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.13■□□□□ 0.33
Tnfsf9P41274 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfsf9P41274 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.12■□□□□ 0.33
Tnfsf9P41274 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Gm12382-201ENSMUST00000122005 922 ntBASIC17.12■□□□□ 0.33
Tnfsf9P41274 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.12■□□□□ 0.33
Tnfsf9P41274 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.12■□□□□ 0.33
Tnfsf9P41274 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfsf9P41274 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms