Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.86□□□□□ -0.03
Abca1P41233 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.86□□□□□ -0.03
Abca1P41233 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Abca1P41233 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Abca1P41233 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Abca1P41233 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.85□□□□□ -0.03
Abca1P41233 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Abca1P41233 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Gm7889-201ENSMUST00000185591 958 ntBASIC14.85□□□□□ -0.03
Abca1P41233 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Abca1P41233 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Abca1P41233 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.85□□□□□ -0.03
Abca1P41233 Gm30025-201ENSMUST00000218555 728 ntBASIC14.85□□□□□ -0.03
Abca1P41233 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Abca1P41233 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Abca1P41233 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Gm21362-201ENSMUST00000194272 928 ntBASIC14.84□□□□□ -0.03
Abca1P41233 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Abca1P41233 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Abca1P41233 Gm13559-201ENSMUST00000120476 863 ntBASIC14.83□□□□□ -0.03
Abca1P41233 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.83□□□□□ -0.03
Abca1P41233 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.83□□□□□ -0.03
Abca1P41233 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Abca1P41233 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Abca1P41233 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Abca1P41233 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Abca1P41233 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Abca1P41233 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Abca1P41233 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Gm11927-201ENSMUST00000118472 759 ntBASIC14.83□□□□□ -0.04
Abca1P41233 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.83□□□□□ -0.04
Abca1P41233 Gm11539-201ENSMUST00000119837 557 ntBASIC14.83□□□□□ -0.04
Abca1P41233 Gm13436-201ENSMUST00000120418 567 ntBASIC14.83□□□□□ -0.04
Abca1P41233 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.83□□□□□ -0.04
Abca1P41233 Gm27741-201ENSMUST00000185060 237 ntBASIC14.83□□□□□ -0.04
Abca1P41233 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.83□□□□□ -0.04
Abca1P41233 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Abca1P41233 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Abca1P41233 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.82□□□□□ -0.04
Abca1P41233 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Odf3b-204ENSMUST00000227834 930 ntBASIC14.82□□□□□ -0.04
Abca1P41233 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.82□□□□□ -0.04
Abca1P41233 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Abca1P41233 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.81□□□□□ -0.04
Abca1P41233 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Abca1P41233 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Abca1P41233 Timm23-208ENSMUST00000226683 750 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms