Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.17■□□□□ 0.34
Cdh4P39038 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cdh4P39038 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.17■□□□□ 0.34
Cdh4P39038 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh4P39038 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdh4P39038 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdh4P39038 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Gm11249-201ENSMUST00000117071 859 ntBASIC17.16■□□□□ 0.34
Cdh4P39038 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.16■□□□□ 0.34
Cdh4P39038 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.16■□□□□ 0.34
Cdh4P39038 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdh4P39038 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh4P39038 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.15■□□□□ 0.34
Cdh4P39038 Gm38285-201ENSMUST00000192928 922 ntBASIC17.15■□□□□ 0.34
Cdh4P39038 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdh4P39038 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cdh4P39038 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh4P39038 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.15■□□□□ 0.34
Cdh4P39038 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.15■□□□□ 0.34
Cdh4P39038 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdh4P39038 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cdh4P39038 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh4P39038 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh4P39038 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh4P39038 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh4P39038 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdh4P39038 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.13■□□□□ 0.33
Cdh4P39038 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdh4P39038 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdh4P39038 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh4P39038 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Cdh4P39038 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh4P39038 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdh4P39038 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdh4P39038 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdh4P39038 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh4P39038 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh4P39038 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cdh4P39038 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh4P39038 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdh4P39038 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms