Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.67■□□□□ 0.42
HmgclP38060 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.67■□□□□ 0.42
HmgclP38060 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HmgclP38060 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HmgclP38060 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
HmgclP38060 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Mtag2-201ENSMUST00000058665 714 ntBASIC17.66■□□□□ 0.42
HmgclP38060 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.66■□□□□ 0.42
HmgclP38060 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.66■□□□□ 0.42
HmgclP38060 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.66■□□□□ 0.42
HmgclP38060 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HmgclP38060 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
HmgclP38060 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HmgclP38060 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HmgclP38060 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
HmgclP38060 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Gm11249-201ENSMUST00000117071 859 ntBASIC17.65■□□□□ 0.42
HmgclP38060 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
HmgclP38060 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.65■□□□□ 0.42
HmgclP38060 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HmgclP38060 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
HmgclP38060 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.64■□□□□ 0.41
HmgclP38060 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.64■□□□□ 0.41
HmgclP38060 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.64■□□□□ 0.41
HmgclP38060 Gm29257-201ENSMUST00000186115 639 ntBASIC17.64■□□□□ 0.41
HmgclP38060 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.64■□□□□ 0.41
HmgclP38060 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HmgclP38060 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HmgclP38060 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HmgclP38060 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HmgclP38060 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.63■□□□□ 0.41
HmgclP38060 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HmgclP38060 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.63■□□□□ 0.41
HmgclP38060 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.62■□□□□ 0.41
HmgclP38060 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HmgclP38060 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.62■□□□□ 0.41
HmgclP38060 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Gm12527-201ENSMUST00000117967 564 ntBASIC17.62■□□□□ 0.41
HmgclP38060 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HmgclP38060 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HmgclP38060 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms