Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LdlrP35951 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.84■□□□□ 0.45
LdlrP35951 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
LdlrP35951 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LdlrP35951 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.83■□□□□ 0.44
LdlrP35951 Gm8969-201ENSMUST00000199694 526 ntBASIC17.83■□□□□ 0.44
LdlrP35951 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.83■□□□□ 0.44
LdlrP35951 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LdlrP35951 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
LdlrP35951 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.82■□□□□ 0.44
LdlrP35951 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.82■□□□□ 0.44
LdlrP35951 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LdlrP35951 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LdlrP35951 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LdlrP35951 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.81■□□□□ 0.44
LdlrP35951 Gm20760-201ENSMUST00000179197 648 ntBASIC17.81■□□□□ 0.44
LdlrP35951 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LdlrP35951 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LdlrP35951 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LdlrP35951 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.8■□□□□ 0.44
LdlrP35951 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LdlrP35951 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LdlrP35951 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LdlrP35951 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
LdlrP35951 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LdlrP35951 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.79■□□□□ 0.44
LdlrP35951 Gm22240-201ENSMUST00000175225 82 ntBASIC17.79■□□□□ 0.44
LdlrP35951 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LdlrP35951 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LdlrP35951 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LdlrP35951 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LdlrP35951 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LdlrP35951 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.78■□□□□ 0.44
LdlrP35951 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LdlrP35951 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms