Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm27454-201ENSMUST00000185090 204 ntBASIC18.9■□□□□ 0.62
Rfc1P35601 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rfc1P35601 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.9■□□□□ 0.62
Rfc1P35601 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.9■□□□□ 0.62
Rfc1P35601 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Rfc1P35601 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfc1P35601 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfc1P35601 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfc1P35601 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfc1P35601 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfc1P35601 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.89■□□□□ 0.61
Rfc1P35601 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rfc1P35601 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfc1P35601 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.88■□□□□ 0.61
Rfc1P35601 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.88■□□□□ 0.61
Rfc1P35601 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.88■□□□□ 0.61
Rfc1P35601 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.88■□□□□ 0.61
Rfc1P35601 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.88■□□□□ 0.61
Rfc1P35601 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.88■□□□□ 0.61
Rfc1P35601 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.88■□□□□ 0.61
Rfc1P35601 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfc1P35601 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfc1P35601 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.87■□□□□ 0.61
Rfc1P35601 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfc1P35601 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rfc1P35601 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfc1P35601 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.86■□□□□ 0.61
Rfc1P35601 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfc1P35601 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfc1P35601 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rfc1P35601 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc1P35601 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rfc1P35601 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc1P35601 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rfc1P35601 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rfc1P35601 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc1P35601 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Rfc1P35601 Gm43173-201ENSMUST00000202246 593 ntBASIC18.85■□□□□ 0.61
Rfc1P35601 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc1P35601 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc1P35601 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfc1P35601 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfc1P35601 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfc1P35601 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms