Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Thbs1P35441 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Thbs1P35441 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.57■□□□□ 0.24
Thbs1P35441 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Thbs1P35441 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Thbs1P35441 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.56■□□□□ 0.24
Thbs1P35441 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Thbs1P35441 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.55■□□□□ 0.24
Thbs1P35441 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Thbs1P35441 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Thbs1P35441 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Thbs1P35441 Gm10602-201ENSMUST00000098239 609 ntBASIC16.55■□□□□ 0.24
Thbs1P35441 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Thbs1P35441 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Thbs1P35441 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Thbs1P35441 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Thbs1P35441 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.54■□□□□ 0.24
Thbs1P35441 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thbs1P35441 Gm2399-201ENSMUST00000104944 225 ntBASIC16.54■□□□□ 0.24
Thbs1P35441 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.54■□□□□ 0.24
Thbs1P35441 Gm26524-201ENSMUST00000192339 390 ntBASIC16.54■□□□□ 0.24
Thbs1P35441 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Thbs1P35441 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Thbs1P35441 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Thbs1P35441 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thbs1P35441 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thbs1P35441 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Thbs1P35441 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Thbs1P35441 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thbs1P35441 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.53■□□□□ 0.24
Thbs1P35441 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Thbs1P35441 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thbs1P35441 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thbs1P35441 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.53■□□□□ 0.24
Thbs1P35441 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Thbs1P35441 Gm38285-201ENSMUST00000192928 922 ntBASIC16.53■□□□□ 0.24
Thbs1P35441 Gm44487-201ENSMUST00000205145 325 ntBASIC16.53■□□□□ 0.24
Thbs1P35441 Gm44549-201ENSMUST00000208351 577 ntBASIC16.53■□□□□ 0.24
Thbs1P35441 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.53■□□□□ 0.24
Thbs1P35441 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Thbs1P35441 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thbs1P35441 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.53■□□□□ 0.24
Thbs1P35441 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.53■□□□□ 0.24
Thbs1P35441 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thbs1P35441 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thbs1P35441 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thbs1P35441 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.52■□□□□ 0.24
Thbs1P35441 Gm13148-201ENSMUST00000118892 745 ntBASIC16.52■□□□□ 0.24
Thbs1P35441 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.52■□□□□ 0.24
Thbs1P35441 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thbs1P35441 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Thbs1P35441 Mir5133-201ENSMUST00000174955 77 ntBASIC16.52■□□□□ 0.24
Thbs1P35441 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thbs1P35441 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thbs1P35441 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Thbs1P35441 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Thbs1P35441 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Thbs1P35441 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.52■□□□□ 0.23
Thbs1P35441 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Thbs1P35441 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.51■□□□□ 0.23
Thbs1P35441 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thbs1P35441 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.51■□□□□ 0.23
Thbs1P35441 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Thbs1P35441 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms