Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx1P18111 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx1P18111 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Cdx1P18111 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cdx1P18111 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Cdx1P18111 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdx1P18111 Haglr-201ENSMUST00000100000 2085 ntBASIC14.45□□□□□ -0.1
Cdx1P18111 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Cdx1P18111 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.45□□□□□ -0.1
Cdx1P18111 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Gm42569-201ENSMUST00000200539 472 ntBASIC14.45□□□□□ -0.1
Cdx1P18111 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdx1P18111 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdx1P18111 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdx1P18111 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdx1P18111 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx1P18111 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdx1P18111 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Cdx1P18111 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdx1P18111 Gm29257-201ENSMUST00000186115 639 ntBASIC14.44□□□□□ -0.1
Cdx1P18111 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.44□□□□□ -0.1
Cdx1P18111 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Gm40848-201ENSMUST00000221998 324 ntBASIC14.44□□□□□ -0.1
Cdx1P18111 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.44□□□□□ -0.1
Cdx1P18111 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdx1P18111 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cdx1P18111 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cdx1P18111 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdx1P18111 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdx1P18111 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdx1P18111 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx1P18111 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.43□□□□□ -0.1
Cdx1P18111 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.43□□□□□ -0.1
Cdx1P18111 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdx1P18111 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdx1P18111 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.43□□□□□ -0.1
Cdx1P18111 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.43□□□□□ -0.1
Cdx1P18111 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.43□□□□□ -0.1
Cdx1P18111 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.43□□□□□ -0.1
Cdx1P18111 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.43□□□□□ -0.1
Cdx1P18111 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.43□□□□□ -0.1
Cdx1P18111 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdx1P18111 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdx1P18111 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdx1P18111 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdx1P18111 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx1P18111 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx1P18111 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdx1P18111 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx1P18111 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx1P18111 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx1P18111 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx1P18111 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms