Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hmga1P17095 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmga1P17095 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmga1P17095 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Hmga1P17095 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.39■□□□□ 0.53
Hmga1P17095 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.39■□□□□ 0.53
Hmga1P17095 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.39■□□□□ 0.53
Hmga1P17095 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmga1P17095 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.53
Hmga1P17095 Fst-202ENSMUST00000223640 2612 ntBASIC18.38■□□□□ 0.53
Hmga1P17095 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Hmga1P17095 Gm10517-202ENSMUST00000192970 758 ntBASIC18.38■□□□□ 0.53
Hmga1P17095 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.38■□□□□ 0.53
Hmga1P17095 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.38■□□□□ 0.53
Hmga1P17095 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmga1P17095 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmga1P17095 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmga1P17095 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.37■□□□□ 0.53
Hmga1P17095 Gm30025-201ENSMUST00000218555 728 ntBASIC18.37■□□□□ 0.53
Hmga1P17095 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmga1P17095 Gm9987-201ENSMUST00000069768 567 ntBASIC18.37■□□□□ 0.53
Hmga1P17095 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmga1P17095 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmga1P17095 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hmga1P17095 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hmga1P17095 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.37■□□□□ 0.53
Hmga1P17095 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmga1P17095 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Hmga1P17095 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Hmga1P17095 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hmga1P17095 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hmga1P17095 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmga1P17095 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.35■□□□□ 0.53
Hmga1P17095 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.35■□□□□ 0.53
Hmga1P17095 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Gm6433-201ENSMUST00000118634 875 ntBASIC18.35■□□□□ 0.53
Hmga1P17095 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Gm7977-201ENSMUST00000193787 748 ntBASIC18.35■□□□□ 0.53
Hmga1P17095 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmga1P17095 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hmga1P17095 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hmga1P17095 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hmga1P17095 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hmga1P17095 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.34■□□□□ 0.53
Hmga1P17095 Gm11539-201ENSMUST00000119837 557 ntBASIC18.34■□□□□ 0.53
Hmga1P17095 Gm13436-201ENSMUST00000120418 567 ntBASIC18.34■□□□□ 0.53
Hmga1P17095 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.34■□□□□ 0.53
Hmga1P17095 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmga1P17095 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms