Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp53P15975 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp53P15975 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.77■□□□□ 0.91
Usp53P15975 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp53P15975 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp53P15975 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Mir5122-201ENSMUST00000175004 89 ntBASIC20.76■□□□□ 0.91
Usp53P15975 Mir7071-201ENSMUST00000184847 69 ntBASIC20.76■□□□□ 0.91
Usp53P15975 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp53P15975 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp53P15975 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.75■□□□□ 0.91
Usp53P15975 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.75■□□□□ 0.91
Usp53P15975 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Usp53P15975 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Usp53P15975 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp53P15975 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp53P15975 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Usp53P15975 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Gm12382-201ENSMUST00000122005 922 ntBASIC20.74■□□□□ 0.91
Usp53P15975 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.74■□□□□ 0.91
Usp53P15975 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp53P15975 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp53P15975 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp53P15975 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp53P15975 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.73■□□□□ 0.91
Usp53P15975 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp53P15975 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.73■□□□□ 0.91
Usp53P15975 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp53P15975 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp53P15975 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp53P15975 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Usp53P15975 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp53P15975 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp53P15975 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp53P15975 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.73■□□□□ 0.91
Usp53P15975 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Usp53P15975 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Gm15565-201ENSMUST00000118890 427 ntBASIC20.72■□□□□ 0.91
Usp53P15975 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.72■□□□□ 0.91
Usp53P15975 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Usp53P15975 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp53P15975 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp53P15975 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp53P15975 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp53P15975 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp53P15975 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.71■□□□□ 0.91
Usp53P15975 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp53P15975 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp53P15975 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Usp53P15975 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp53P15975 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Usp53P15975 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usp53P15975 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Usp53P15975 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usp53P15975 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp53P15975 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms