Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Rb1P13405 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rb1P13405 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.26■□□□□ 0.51
Rb1P13405 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rb1P13405 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.25■□□□□ 0.51
Rb1P13405 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Rb1P13405 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.25■□□□□ 0.51
Rb1P13405 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.25■□□□□ 0.51
Rb1P13405 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rb1P13405 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rb1P13405 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rb1P13405 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.24■□□□□ 0.51
Rb1P13405 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
Rb1P13405 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.24■□□□□ 0.51
Rb1P13405 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.24■□□□□ 0.51
Rb1P13405 Mir1199-201ENSMUST00000117015 119 ntBASIC18.24■□□□□ 0.51
Rb1P13405 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rb1P13405 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.24■□□□□ 0.51
Rb1P13405 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.24■□□□□ 0.51
Rb1P13405 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rb1P13405 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rb1P13405 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.23■□□□□ 0.51
Rb1P13405 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Gm13158-201ENSMUST00000122007 736 ntBASIC18.23■□□□□ 0.51
Rb1P13405 Gm10698-201ENSMUST00000182663 604 ntBASIC18.23■□□□□ 0.51
Rb1P13405 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Rb1P13405 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.23■□□□□ 0.51
Rb1P13405 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rb1P13405 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rb1P13405 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rb1P13405 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Gm2399-201ENSMUST00000104944 225 ntBASIC18.22■□□□□ 0.51
Rb1P13405 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.22■□□□□ 0.51
Rb1P13405 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.22■□□□□ 0.51
Rb1P13405 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.22■□□□□ 0.51
Rb1P13405 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rb1P13405 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rb1P13405 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rb1P13405 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rb1P13405 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.21■□□□□ 0.51
Rb1P13405 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rb1P13405 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rb1P13405 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rb1P13405 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rb1P13405 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.21■□□□□ 0.51
Rb1P13405 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rb1P13405 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rb1P13405 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.2■□□□□ 0.5
Rb1P13405 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rb1P13405 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rb1P13405 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.2■□□□□ 0.5
Rb1P13405 Gm11643-201ENSMUST00000119578 864 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms