Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hoxc6P10629 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hoxc6P10629 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hoxc6P10629 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.96■□□□□ 0.79
Hoxc6P10629 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Hoxc6P10629 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxc6P10629 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc6P10629 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.95■□□□□ 0.78
Hoxc6P10629 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hoxc6P10629 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.95■□□□□ 0.78
Hoxc6P10629 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc6P10629 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc6P10629 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.95■□□□□ 0.78
Hoxc6P10629 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc6P10629 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxc6P10629 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.94■□□□□ 0.78
Hoxc6P10629 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Gm18101-201ENSMUST00000215769 548 ntBASIC19.94■□□□□ 0.78
Hoxc6P10629 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc6P10629 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Hoxc6P10629 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hoxc6P10629 Gm22697-201ENSMUST00000175194 63 ntBASIC19.93■□□□□ 0.78
Hoxc6P10629 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.93■□□□□ 0.78
Hoxc6P10629 Gm4974-201ENSMUST00000209974 875 ntBASIC19.93■□□□□ 0.78
Hoxc6P10629 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hoxc6P10629 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 BC021767-201ENSMUST00000126387 1716 ntBASIC19.93■□□□□ 0.78
Hoxc6P10629 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc6P10629 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.92■□□□□ 0.78
Hoxc6P10629 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Hoxc6P10629 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.92■□□□□ 0.78
Hoxc6P10629 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hoxc6P10629 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.92■□□□□ 0.78
Hoxc6P10629 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Hoxc6P10629 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.92■□□□□ 0.78
Hoxc6P10629 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc6P10629 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Hoxc6P10629 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.91■□□□□ 0.78
Hoxc6P10629 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hoxc6P10629 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.91■□□□□ 0.78
Hoxc6P10629 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hoxc6P10629 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc6P10629 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hoxc6P10629 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc6P10629 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hoxc6P10629 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hoxc6P10629 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc6P10629 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc6P10629 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc6P10629 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Hoxc6P10629 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms