Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccl1P10146 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Ccl1P10146 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccl1P10146 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.96□□□□□ -0.17
Ccl1P10146 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl1P10146 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.96□□□□□ -0.18
Ccl1P10146 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl1P10146 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl1P10146 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl1P10146 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl1P10146 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl1P10146 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccl1P10146 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccl1P10146 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccl1P10146 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl1P10146 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl1P10146 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccl1P10146 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccl1P10146 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Ccl1P10146 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccl1P10146 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.94□□□□□ -0.18
Ccl1P10146 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccl1P10146 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl1P10146 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Gm7860-201ENSMUST00000121190 879 ntBASIC13.93□□□□□ -0.18
Ccl1P10146 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccl1P10146 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl1P10146 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ccl1P10146 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccl1P10146 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Ccl1P10146 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccl1P10146 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccl1P10146 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl1P10146 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms