Protein–RNA interactions for Protein: P0DM65

Becn2, Beclin-2, mousemouse

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn2P0DM65 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.83■□□□□ 0.6
Becn2P0DM65 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Becn2P0DM65 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Becn2P0DM65 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Becn2P0DM65 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Becn2P0DM65 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Becn2P0DM65 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Becn2P0DM65 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Becn2P0DM65 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Becn2P0DM65 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Becn2P0DM65 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Becn2P0DM65 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Becn2P0DM65 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.82■□□□□ 0.6
Becn2P0DM65 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.82■□□□□ 0.6
Becn2P0DM65 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.81■□□□□ 0.6
Becn2P0DM65 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Becn2P0DM65 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.81■□□□□ 0.6
Becn2P0DM65 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.81■□□□□ 0.6
Becn2P0DM65 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Becn2P0DM65 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn2P0DM65 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Becn2P0DM65 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Becn2P0DM65 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Becn2P0DM65 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Becn2P0DM65 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.8■□□□□ 0.6
Becn2P0DM65 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Becn2P0DM65 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn2P0DM65 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.79■□□□□ 0.6
Becn2P0DM65 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.79■□□□□ 0.6
Becn2P0DM65 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.79■□□□□ 0.6
Becn2P0DM65 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Becn2P0DM65 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn2P0DM65 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.78■□□□□ 0.6
Becn2P0DM65 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Becn2P0DM65 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.78■□□□□ 0.6
Becn2P0DM65 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Becn2P0DM65 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
Becn2P0DM65 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Becn2P0DM65 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn2P0DM65 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn2P0DM65 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn2P0DM65 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Becn2P0DM65 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Becn2P0DM65 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.77■□□□□ 0.6
Becn2P0DM65 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn2P0DM65 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn2P0DM65 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Becn2P0DM65 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.77■□□□□ 0.6
Becn2P0DM65 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Becn2P0DM65 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms