Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp6P0C0A3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp6P0C0A3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp6P0C0A3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp6P0C0A3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp6P0C0A3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp6P0C0A3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp6P0C0A3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp6P0C0A3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp6P0C0A3 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.48■□□□□ 0.71
Chmp6P0C0A3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp6P0C0A3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp6P0C0A3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp6P0C0A3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms