Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.22■□□□□ 0.67
Hoxc8P09025 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Hoxc8P09025 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.22■□□□□ 0.67
Hoxc8P09025 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.22■□□□□ 0.67
Hoxc8P09025 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc8P09025 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Gm7638-201ENSMUST00000121348 967 ntBASIC19.21■□□□□ 0.67
Hoxc8P09025 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Gm7791-201ENSMUST00000219066 539 ntBASIC19.21■□□□□ 0.67
Hoxc8P09025 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc8P09025 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Hoxc8P09025 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Hoxc8P09025 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hoxc8P09025 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hoxc8P09025 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hoxc8P09025 AA414768-201ENSMUST00000121924 1257 ntBASIC19.2■□□□□ 0.66
Hoxc8P09025 Gm16061-201ENSMUST00000122167 857 ntBASIC19.2■□□□□ 0.66
Hoxc8P09025 Gm29791-202ENSMUST00000207888 369 ntBASIC19.2■□□□□ 0.66
Hoxc8P09025 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hoxc8P09025 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Hoxc8P09025 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
Hoxc8P09025 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc8P09025 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc8P09025 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
Hoxc8P09025 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc8P09025 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc8P09025 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hoxc8P09025 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc8P09025 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxc8P09025 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc8P09025 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc8P09025 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc8P09025 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc8P09025 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc8P09025 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc8P09025 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hoxc8P09025 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hoxc8P09025 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hoxc8P09025 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc8P09025 Gm18101-201ENSMUST00000215769 548 ntBASIC19.17■□□□□ 0.66
Hoxc8P09025 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hoxc8P09025 Gm7367-201ENSMUST00000057611 492 ntBASIC19.17■□□□□ 0.66
Hoxc8P09025 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc8P09025 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc8P09025 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Hoxc8P09025 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc8P09025 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hoxc8P09025 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc8P09025 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Gm22697-201ENSMUST00000175194 63 ntBASIC19.16■□□□□ 0.66
Hoxc8P09025 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc8P09025 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc8P09025 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms