Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
P04224 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.73■□□□□ 0.11
P04224 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.73■□□□□ 0.11
P04224 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.73■□□□□ 0.11
P04224 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
P04224 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04224 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
P04224 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
P04224 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Gm43137-201ENSMUST00000198052 594 ntBASIC15.72■□□□□ 0.11
P04224 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
P04224 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04224 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
P04224 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
P04224 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
P04224 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
P04224 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.71■□□□□ 0.11
P04224 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.71■□□□□ 0.11
P04224 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.71■□□□□ 0.11
P04224 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
P04224 Gm9847-201ENSMUST00000052528 599 ntBASIC15.71■□□□□ 0.11
P04224 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04224 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
P04224 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.71■□□□□ 0.1
P04224 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04224 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04224 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
P04224 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.7■□□□□ 0.1
P04224 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.7■□□□□ 0.1
P04224 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.7■□□□□ 0.1
P04224 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
P04224 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04224 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
P04224 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.69■□□□□ 0.1
P04224 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
P04224 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.69■□□□□ 0.1
P04224 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04224 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms