Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm24841-201ENSMUST00000158676 357 ntBASIC18.88■□□□□ 0.61
P04214 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04214 Gm28033-201ENSMUST00000184224 96 ntBASIC18.88■□□□□ 0.61
P04214 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04214 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
P04214 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P04214 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
P04214 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04214 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04214 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04214 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.87■□□□□ 0.61
P04214 Gm29518-201ENSMUST00000190858 372 ntBASIC18.87■□□□□ 0.61
P04214 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04214 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.87■□□□□ 0.61
P04214 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.86■□□□□ 0.61
P04214 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.86■□□□□ 0.61
P04214 Mir1668-201ENSMUST00000184114 107 ntBASIC18.86■□□□□ 0.61
P04214 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
P04214 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.86■□□□□ 0.61
P04214 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04214 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
P04214 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P04214 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
P04214 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.85■□□□□ 0.61
P04214 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P04214 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.85■□□□□ 0.61
P04214 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P04214 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
P04214 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P04214 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P04214 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P04214 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04214 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
P04214 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04214 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04214 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.84■□□□□ 0.61
P04214 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04214 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.84■□□□□ 0.61
P04214 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.84■□□□□ 0.61
P04214 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04214 Gm17807-201ENSMUST00000186869 298 ntBASIC18.84■□□□□ 0.61
P04214 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04214 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P04214 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P04214 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P04214 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P04214 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P04214 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04214 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04214 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
P04214 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
P04214 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04214 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P04214 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04214 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.83■□□□□ 0.6
P04214 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
P04214 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.82■□□□□ 0.6
P04214 Gm7461-201ENSMUST00000058918 827 ntBASIC18.82■□□□□ 0.6
P04214 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P04214 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04214 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
P04214 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.81■□□□□ 0.6
P04214 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04214 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms