Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
P03980 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.89□□□□□ -0.19
P03980 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.89□□□□□ -0.19
P03980 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
P03980 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
P03980 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P03980 Gm13241-201ENSMUST00000094493 780 ntBASIC13.89□□□□□ -0.19
P03980 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
P03980 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P03980 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Gm26833-201ENSMUST00000180899 440 ntBASIC13.88□□□□□ -0.19
P03980 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.88□□□□□ -0.19
P03980 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.88□□□□□ -0.19
P03980 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.88□□□□□ -0.19
P03980 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
P03980 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
P03980 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
P03980 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P03980 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P03980 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P03980 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.87□□□□□ -0.19
P03980 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.87□□□□□ -0.19
P03980 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.87□□□□□ -0.19
P03980 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P03980 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.87□□□□□ -0.19
P03980 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
P03980 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.87□□□□□ -0.19
P03980 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P03980 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
P03980 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
P03980 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
P03980 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
P03980 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P03980 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
P03980 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.85□□□□□ -0.19
P03980 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
P03980 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P03980 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms