Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Hoxa3P02831 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Hoxa3P02831 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Hoxa3P02831 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Hoxa3P02831 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Hoxa3P02831 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa3P02831 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.01□□□□□ -0.01
Hoxa3P02831 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hoxa3P02831 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Hoxa3P02831 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxa3P02831 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hoxa3P02831 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.01□□□□□ -0.01
Hoxa3P02831 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa3P02831 Gm15853-202ENSMUST00000195518 2041 ntBASIC15□□□□□ -0.01
Hoxa3P02831 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15□□□□□ -0.01
Hoxa3P02831 Gm18666-201ENSMUST00000190039 958 ntBASIC15□□□□□ -0.01
Hoxa3P02831 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Hoxa3P02831 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Hoxa3P02831 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15□□□□□ -0.01
Hoxa3P02831 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxa3P02831 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxa3P02831 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa3P02831 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.99□□□□□ -0.01
Hoxa3P02831 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxa3P02831 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hoxa3P02831 Gm22325-201ENSMUST00000158904 308 ntBASIC14.99□□□□□ -0.01
Hoxa3P02831 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Flg-201ENSMUST00000050758 1488 ntBASIC14.99□□□□□ -0.01
Hoxa3P02831 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxa3P02831 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa3P02831 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Grk6-206ENSMUST00000224995 2971 ntBASIC14.98□□□□□ -0.01
Hoxa3P02831 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hoxa3P02831 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Gm13158-201ENSMUST00000122007 736 ntBASIC14.98□□□□□ -0.01
Hoxa3P02831 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.98□□□□□ -0.01
Hoxa3P02831 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.98□□□□□ -0.01
Hoxa3P02831 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa3P02831 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.98□□□□□ -0.01
Hoxa3P02831 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms