Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hbb-b1P02088 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hbb-b1P02088 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hbb-b1P02088 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hbb-b1P02088 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Gm10399-202ENSMUST00000202768 748 ntBASIC12.7□□□□□ -0.38
Hbb-b1P02088 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hbb-b1P02088 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hbb-b1P02088 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hbb-b1P02088 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.68□□□□□ -0.38
Hbb-b1P02088 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.68□□□□□ -0.38
Hbb-b1P02088 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hbb-b1P02088 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.67□□□□□ -0.38
Hbb-b1P02088 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms