Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.53□□□□□ -0.24
P01739 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
P01739 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
P01739 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01739 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.52□□□□□ -0.24
P01739 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01739 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
P01739 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.52□□□□□ -0.25
P01739 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.52□□□□□ -0.25
P01739 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
P01739 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01739 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
P01739 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
P01739 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.52□□□□□ -0.25
P01739 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Gm18284-201ENSMUST00000172604 624 ntBASIC13.51□□□□□ -0.25
P01739 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.51□□□□□ -0.25
P01739 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
P01739 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01739 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.5□□□□□ -0.25
P01739 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.5□□□□□ -0.25
P01739 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.5□□□□□ -0.25
P01739 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P01739 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P01739 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01739 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.5□□□□□ -0.25
P01739 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
P01739 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.5□□□□□ -0.25
P01739 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.49□□□□□ -0.25
P01739 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
P01739 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
P01739 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.49□□□□□ -0.25
P01739 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.49□□□□□ -0.25
P01739 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P01739 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.49□□□□□ -0.25
P01739 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P01739 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P01739 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.48□□□□□ -0.25
P01739 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.48□□□□□ -0.25
P01739 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
P01739 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01739 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms