Protein–RNA interactions for Protein: P01653

Ig kappa chain V-V region W3082, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01653 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01653 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P01653 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01653 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01653 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
P01653 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.71■□□□□ 0.59
P01653 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
P01653 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
P01653 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.71■□□□□ 0.59
P01653 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.71■□□□□ 0.59
P01653 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.71■□□□□ 0.59
P01653 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01653 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
P01653 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.71■□□□□ 0.58
P01653 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
P01653 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.7■□□□□ 0.58
P01653 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
P01653 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P01653 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P01653 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01653 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P01653 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.69■□□□□ 0.58
P01653 Mir1199-201ENSMUST00000117015 119 ntBASIC18.69■□□□□ 0.58
P01653 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P01653 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
P01653 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.69■□□□□ 0.58
P01653 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.69■□□□□ 0.58
P01653 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01653 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.68■□□□□ 0.58
P01653 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
P01653 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P01653 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.68■□□□□ 0.58
P01653 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.68■□□□□ 0.58
P01653 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P01653 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P01653 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.68■□□□□ 0.58
P01653 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01653 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Idnk-204ENSMUST00000226010 1898 ntBASIC18.67■□□□□ 0.58
P01653 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.67■□□□□ 0.58
P01653 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
P01653 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Gm12382-201ENSMUST00000122005 922 ntBASIC18.67■□□□□ 0.58
P01653 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.67■□□□□ 0.58
P01653 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
P01653 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.67■□□□□ 0.58
P01653 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01653 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms