Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Syn1O88935 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Syn1O88935 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Syn1O88935 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.46■□□□□ 0.55
Syn1O88935 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Syn1O88935 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.46■□□□□ 0.55
Syn1O88935 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Syn1O88935 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syn1O88935 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Syn1O88935 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Syn1O88935 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.45■□□□□ 0.54
Syn1O88935 Gm18958-201ENSMUST00000174258 762 ntBASIC18.45■□□□□ 0.54
Syn1O88935 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.45■□□□□ 0.54
Syn1O88935 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syn1O88935 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.44■□□□□ 0.54
Syn1O88935 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Syn1O88935 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Syn1O88935 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.44■□□□□ 0.54
Syn1O88935 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.44■□□□□ 0.54
Syn1O88935 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.44■□□□□ 0.54
Syn1O88935 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Syn1O88935 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Syn1O88935 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Syn1O88935 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Syn1O88935 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Syn1O88935 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Syn1O88935 Gm24589-201ENSMUST00000116692 94 ntBASIC18.43■□□□□ 0.54
Syn1O88935 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.43■□□□□ 0.54
Syn1O88935 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Syn1O88935 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Syn1O88935 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Syn1O88935 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Syn1O88935 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Syn1O88935 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Syn1O88935 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.42■□□□□ 0.54
Syn1O88935 Gm27389-201ENSMUST00000183622 195 ntBASIC18.42■□□□□ 0.54
Syn1O88935 Gm21559-201ENSMUST00000220638 855 ntBASIC18.42■□□□□ 0.54
Syn1O88935 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Gm8587-201ENSMUST00000076538 843 ntBASIC18.42■□□□□ 0.54
Syn1O88935 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Syn1O88935 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.42■□□□□ 0.54
Syn1O88935 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Syn1O88935 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.41■□□□□ 0.54
Syn1O88935 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Syn1O88935 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Gm16061-201ENSMUST00000122167 857 ntBASIC18.41■□□□□ 0.54
Syn1O88935 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.41■□□□□ 0.54
Syn1O88935 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Gm17808-201ENSMUST00000200859 894 ntBASIC18.41■□□□□ 0.54
Syn1O88935 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.41■□□□□ 0.54
Syn1O88935 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.41■□□□□ 0.54
Syn1O88935 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Syn1O88935 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.4■□□□□ 0.54
Syn1O88935 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Syn1O88935 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Syn1O88935 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms