Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hdac3O88895 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Hdac3O88895 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Hdac3O88895 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Gm6420-201ENSMUST00000193885 723 ntBASIC16.02■□□□□ 0.16
Hdac3O88895 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hdac3O88895 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac3O88895 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac3O88895 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac3O88895 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac3O88895 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac3O88895 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hdac3O88895 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Hdac3O88895 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.01■□□□□ 0.15
Hdac3O88895 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Hdac3O88895 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Hdac3O88895 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.01■□□□□ 0.15
Hdac3O88895 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.01■□□□□ 0.15
Hdac3O88895 Gm42569-201ENSMUST00000200539 472 ntBASIC16.01■□□□□ 0.15
Hdac3O88895 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.01■□□□□ 0.15
Hdac3O88895 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Hdac3O88895 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.01■□□□□ 0.15
Hdac3O88895 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hdac3O88895 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hdac3O88895 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hdac3O88895 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Gm7290-201ENSMUST00000104990 617 ntBASIC16■□□□□ 0.15
Hdac3O88895 Gm12918-201ENSMUST00000120234 636 ntBASIC16■□□□□ 0.15
Hdac3O88895 Gm15710-201ENSMUST00000121821 636 ntBASIC16■□□□□ 0.15
Hdac3O88895 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hdac3O88895 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Gm26571-201ENSMUST00000181399 666 ntBASIC16■□□□□ 0.15
Hdac3O88895 Gm5075-201ENSMUST00000196916 622 ntBASIC16■□□□□ 0.15
Hdac3O88895 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16■□□□□ 0.15
Hdac3O88895 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16■□□□□ 0.15
Hdac3O88895 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16■□□□□ 0.15
Hdac3O88895 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Hdac3O88895 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16■□□□□ 0.15
Hdac3O88895 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16■□□□□ 0.15
Hdac3O88895 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hdac3O88895 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16■□□□□ 0.15
Hdac3O88895 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hdac3O88895 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Hdac3O88895 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Hdac3O88895 Gm27405-201ENSMUST00000184201 112 ntBASIC15.99■□□□□ 0.15
Hdac3O88895 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.99■□□□□ 0.15
Hdac3O88895 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hdac3O88895 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.99■□□□□ 0.15
Hdac3O88895 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
Hdac3O88895 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.98■□□□□ 0.15
Hdac3O88895 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Hdac3O88895 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.98■□□□□ 0.15
Hdac3O88895 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.98■□□□□ 0.15
Hdac3O88895 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Hdac3O88895 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.98■□□□□ 0.15
Hdac3O88895 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.98■□□□□ 0.15
Hdac3O88895 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hdac3O88895 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms