Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha4O88689 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdha4O88689 Gm15378-201ENSMUST00000121894 207 ntBASIC20.04■□□□□ 0.8
Pcdha4O88689 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdha4O88689 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdha4O88689 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha4O88689 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdha4O88689 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdha4O88689 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha4O88689 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha4O88689 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha4O88689 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha4O88689 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdha4O88689 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdha4O88689 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdha4O88689 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Gm10698-201ENSMUST00000182663 604 ntBASIC20.03■□□□□ 0.8
Pcdha4O88689 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.03■□□□□ 0.8
Pcdha4O88689 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.03■□□□□ 0.8
Pcdha4O88689 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdha4O88689 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha4O88689 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha4O88689 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha4O88689 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha4O88689 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdha4O88689 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha4O88689 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha4O88689 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha4O88689 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha4O88689 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pcdha4O88689 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pcdha4O88689 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pcdha4O88689 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha4O88689 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdha4O88689 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha4O88689 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha4O88689 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
Pcdha4O88689 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.01■□□□□ 0.79
Pcdha4O88689 Gm18025-201ENSMUST00000221733 862 ntBASIC20.01■□□□□ 0.79
Pcdha4O88689 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdha4O88689 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.01■□□□□ 0.79
Pcdha4O88689 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha4O88689 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdha4O88689 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20■□□□□ 0.79
Pcdha4O88689 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20■□□□□ 0.79
Pcdha4O88689 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Pcdha4O88689 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha4O88689 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha4O88689 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdha4O88689 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha4O88689 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha4O88689 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdha4O88689 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Pcdha4O88689 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha4O88689 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha4O88689 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms