Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.51■□□□□ 0.39
Cacna1hO88427 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1hO88427 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1hO88427 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1hO88427 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cacna1hO88427 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.5■□□□□ 0.39
Cacna1hO88427 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1hO88427 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1hO88427 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.5■□□□□ 0.39
Cacna1hO88427 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.5■□□□□ 0.39
Cacna1hO88427 Gm15794-201ENSMUST00000120182 631 ntBASIC17.5■□□□□ 0.39
Cacna1hO88427 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1hO88427 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cacna1hO88427 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Cacna1hO88427 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.49■□□□□ 0.39
Cacna1hO88427 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.49■□□□□ 0.39
Cacna1hO88427 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.49■□□□□ 0.39
Cacna1hO88427 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.49■□□□□ 0.39
Cacna1hO88427 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cacna1hO88427 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1hO88427 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.48■□□□□ 0.39
Cacna1hO88427 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.48■□□□□ 0.39
Cacna1hO88427 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Rps4l-201ENSMUST00000071745 943 ntBASIC17.48■□□□□ 0.39
Cacna1hO88427 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1hO88427 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1hO88427 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.48■□□□□ 0.39
Cacna1hO88427 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Cacna1hO88427 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1hO88427 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1hO88427 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.47■□□□□ 0.39
Cacna1hO88427 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.47■□□□□ 0.39
Cacna1hO88427 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1hO88427 Gm26039-201ENSMUST00000158152 144 ntBASIC17.47■□□□□ 0.39
Cacna1hO88427 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1hO88427 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1hO88427 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.47■□□□□ 0.39
Cacna1hO88427 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1hO88427 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.47■□□□□ 0.39
Cacna1hO88427 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cacna1hO88427 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.47■□□□□ 0.39
Cacna1hO88427 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.47■□□□□ 0.39
Cacna1hO88427 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1hO88427 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.47■□□□□ 0.39
Cacna1hO88427 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cacna1hO88427 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1hO88427 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cacna1hO88427 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.46■□□□□ 0.39
Cacna1hO88427 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Cacna1hO88427 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.46■□□□□ 0.39
Cacna1hO88427 Gm2756-201ENSMUST00000195851 400 ntBASIC17.46■□□□□ 0.39
Cacna1hO88427 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cacna1hO88427 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1hO88427 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1hO88427 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cacna1hO88427 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.46■□□□□ 0.39
Cacna1hO88427 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.46■□□□□ 0.39
Cacna1hO88427 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Cacna1hO88427 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Cacna1hO88427 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.46■□□□□ 0.39
Cacna1hO88427 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1hO88427 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.45■□□□□ 0.38
Cacna1hO88427 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1hO88427 Gm5186-201ENSMUST00000218781 920 ntBASIC17.45■□□□□ 0.38
Cacna1hO88427 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms