Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cdh16O88338 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.58■□□□□ 0.4
Cdh16O88338 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh16O88338 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdh16O88338 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdh16O88338 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdh16O88338 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.57■□□□□ 0.4
Cdh16O88338 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh16O88338 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdh16O88338 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Gm11421-201ENSMUST00000122124 294 ntBASIC17.56■□□□□ 0.4
Cdh16O88338 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdh16O88338 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.56■□□□□ 0.4
Cdh16O88338 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cdh16O88338 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh16O88338 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh16O88338 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh16O88338 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cdh16O88338 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh16O88338 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdh16O88338 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Gm43173-201ENSMUST00000202246 593 ntBASIC17.55■□□□□ 0.4
Cdh16O88338 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdh16O88338 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh16O88338 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh16O88338 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdh16O88338 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh16O88338 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh16O88338 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh16O88338 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Cdh16O88338 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdh16O88338 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdh16O88338 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh16O88338 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms