Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 Gm42642-201ENSMUST00000200683 355 ntBASIC17.82■□□□□ 0.44
Pknox1O70477 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pknox1O70477 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.82■□□□□ 0.44
Pknox1O70477 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.82■□□□□ 0.44
Pknox1O70477 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pknox1O70477 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Pknox1O70477 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.81■□□□□ 0.44
Pknox1O70477 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.81■□□□□ 0.44
Pknox1O70477 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pknox1O70477 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pknox1O70477 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pknox1O70477 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.8■□□□□ 0.44
Pknox1O70477 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Pknox1O70477 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pknox1O70477 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.8■□□□□ 0.44
Pknox1O70477 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pknox1O70477 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pknox1O70477 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pknox1O70477 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pknox1O70477 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Pknox1O70477 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.79■□□□□ 0.44
Pknox1O70477 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.79■□□□□ 0.44
Pknox1O70477 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.79■□□□□ 0.44
Pknox1O70477 Gm5874-201ENSMUST00000096101 508 ntBASIC17.79■□□□□ 0.44
Pknox1O70477 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pknox1O70477 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pknox1O70477 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pknox1O70477 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pknox1O70477 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
Pknox1O70477 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pknox1O70477 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.78■□□□□ 0.44
Pknox1O70477 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pknox1O70477 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pknox1O70477 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pknox1O70477 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pknox1O70477 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pknox1O70477 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms