Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SncaO55042 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.89□□□□□ -0.03
SncaO55042 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.89□□□□□ -0.03
SncaO55042 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SncaO55042 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SncaO55042 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SncaO55042 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.88□□□□□ -0.03
SncaO55042 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.88□□□□□ -0.03
SncaO55042 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SncaO55042 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SncaO55042 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SncaO55042 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SncaO55042 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SncaO55042 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SncaO55042 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SncaO55042 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.87□□□□□ -0.03
SncaO55042 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SncaO55042 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.87□□□□□ -0.03
SncaO55042 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.87□□□□□ -0.03
SncaO55042 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.87□□□□□ -0.03
SncaO55042 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SncaO55042 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SncaO55042 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SncaO55042 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SncaO55042 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SncaO55042 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.87□□□□□ -0.03
SncaO55042 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SncaO55042 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SncaO55042 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SncaO55042 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SncaO55042 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SncaO55042 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.86□□□□□ -0.03
SncaO55042 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
SncaO55042 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SncaO55042 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.85□□□□□ -0.03
SncaO55042 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.85□□□□□ -0.03
SncaO55042 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.85□□□□□ -0.03
SncaO55042 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.85□□□□□ -0.03
SncaO55042 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SncaO55042 Reep4-203ENSMUST00000226563 1444 ntBASIC14.84□□□□□ -0.03
SncaO55042 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SncaO55042 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.84□□□□□ -0.03
SncaO55042 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.84□□□□□ -0.03
SncaO55042 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.84□□□□□ -0.03
SncaO55042 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.84□□□□□ -0.03
SncaO55042 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SncaO55042 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms