Protein–RNA interactions for Protein: O55013

Trappc3, Trafficking protein particle complex subunit 3, mousemouse

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc3O55013 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.27■□□□□ 0.68
Trappc3O55013 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trappc3O55013 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trappc3O55013 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.27■□□□□ 0.68
Trappc3O55013 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trappc3O55013 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trappc3O55013 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trappc3O55013 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.26■□□□□ 0.67
Trappc3O55013 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trappc3O55013 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trappc3O55013 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trappc3O55013 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trappc3O55013 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Trappc3O55013 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Trappc3O55013 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trappc3O55013 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.26■□□□□ 0.67
Trappc3O55013 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trappc3O55013 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trappc3O55013 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trappc3O55013 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trappc3O55013 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trappc3O55013 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.25■□□□□ 0.67
Trappc3O55013 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trappc3O55013 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trappc3O55013 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trappc3O55013 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trappc3O55013 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.24■□□□□ 0.67
Trappc3O55013 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.24■□□□□ 0.67
Trappc3O55013 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
Trappc3O55013 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.24■□□□□ 0.67
Trappc3O55013 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trappc3O55013 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trappc3O55013 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trappc3O55013 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Trappc3O55013 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.23■□□□□ 0.67
Trappc3O55013 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.23■□□□□ 0.67
Trappc3O55013 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trappc3O55013 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.23■□□□□ 0.67
Trappc3O55013 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trappc3O55013 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.22■□□□□ 0.67
Trappc3O55013 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.22■□□□□ 0.67
Trappc3O55013 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Gm11249-201ENSMUST00000117071 859 ntBASIC19.22■□□□□ 0.67
Trappc3O55013 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.22■□□□□ 0.67
Trappc3O55013 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Trappc3O55013 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trappc3O55013 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.21■□□□□ 0.67
Trappc3O55013 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.21■□□□□ 0.67
Trappc3O55013 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trappc3O55013 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.21■□□□□ 0.67
Trappc3O55013 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trappc3O55013 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trappc3O55013 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc3O55013 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc3O55013 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc3O55013 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trappc3O55013 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms